rs7826828 chr8:133217640 C>A
- Sequence
caaagccccaaggagagagactgg[C/A]gcgccttctagttgcactggtttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MS-1 (Small cell lung carcinoma) J-Lat A72 GM02630 (Fanconi anemi)
- ASB for transcription factors
- SMCA4_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 1.71 | -0.35 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.37 | 2.24 | 1.64 | 1.67 | Weak Concordant |
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Motif analysis
