rs7826830 chr8:94642400 C>T
- Sequence
gtgcggagtttgaatcctagcgcc[C/T]ccatctccaggtccagaccccaga
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi) 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- PKNX1_HUMAN ANDR_HUMAN SNAI2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -1.06 | 1.06 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.63 | -0.05 | 2.00 | n/a | No Hit | |||
| SNAI2_HUMAN | 2.09 | -1.25 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP amyotrophic lateral sclerosis (als) age of onset, late onset alzheimers disease, obesity with early age of onset (age >2), tetrology of fallot