rs7828012 chr8:143191469 G>A
- Sequence
catggcagaaggtgaaggggaagc[G/A]ggcacagcttgtggccagagggag
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) CD14+ monocytes monocyte-derived dendritic cells
- ASB for transcription factors
- TF65_HUMAN STAT1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.10 | -3.83 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 3.75 | n/a | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.23 | 0.16 | 1.79 | -0.34 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Frontal_Cortex_BA9, Heart_Atrial_Appendage, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood