rs7828131 chr8:27583493 T>C

Sequence
ggggagggggactacaggtggcac[T/C]agagggaccccactaaacaaacca
ASB for transcription factors
RARA_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN 1.52 0.28 0.051.00 1.00 0.52 Weak Discordant
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Motif analysis

RARA_HUMAN Weak Discordant
RARA_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  age at death with kuru exposure,  hdl cholesterol,  homa-b,  homa-ir,  salmonella-induced pyroptosis,  waist hip ratio
GTEx eQTL Artery_Tibial,  Muscle_Skeletal,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum

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