rs7830315 chr8:64695804 T>C

Sequence
ctccctctagtggtcaaagtaata[T/C]atgtaaattctcaggttggttaac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) HEK293 (embryonic kidney)
ASB for transcription factors
SMC1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC1A_HUMAN -0.71 2.11 1.000.02 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration homa-b retinopathy in nondiabetics total cholesterol
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Cells_Cultured_fibroblasts Lung Pancreas Skin_Sun_Exposed_Lower_leg Whole_Blood

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