rs7831714 chr8:100901759 C>T
- Sequence
cctctcttgggttctcagcttcct[C/T]atttgcaaaatgagagggttgaac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- SRF_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | -1.77 | 2.32 | 1.00 | 5.08 | Concordant | |||
| MEF2B_HUMAN | 0.50 | -0.50 | 1.00 | 2.63 | Discordant |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood