rs7835270 chr8:102656092 A>G

Sequence
ctgcagcgcgcccaggcactgcgg[A/G]gggccagccccacgtggggggtgg
ASB in cell types
BEAS-2B (bronchial epithelium) HepG2 (hepatoblastoma) CD14+ monocytes HeLa (cervical adenocarcinoma)
ASB for transcription factors
GCR_HUMAN STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.60 0.85 1.003.3·10-5 1.11 n/a No Hit
STAT1_HUMAN 2.33 -0.36 1.6·10-31.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Whole_Blood

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