rs7836626 chr8:123417214 C>T
- Sequence
gatttgctcagcagatctctgctt[C/T]ggggccaggaagggtggagctctg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ARI1B_HUMAN ILF3_HUMAN EGR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.46 | 1.22 | 1.19 | n/a | No Hit | |||
| ARI1B_HUMAN | n/a | 3.18 | 2.00 | n/a | n/a | |||
| ILF3_HUMAN | -1.28 | 2.26 | 2.00 | n/a | n/a | |||
| EGR1_HUMAN | -0.17 | 2.19 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg