rs7836920 chr8:28494188 T>C
- Sequence
gcgcgcgcgctcgtgagctcgctc[T/C]ccgggccgcgcgccccggtgctcg
- ASB in cell types
- adult erythroblasts breast tumor HCT-116 (colon carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- RBBP5_HUMAN ESR1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | n/a | 2.96 | 1.75 | n/a | n/a | |||
| ESR1_HUMAN | -2.26 | 3.06 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -2.15 | 2.95 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood