rs784516 chr3:39146106 G>A
- Sequence
cagcattttgacaggagagggacc[G/A]gcttgacaggccccgtggcagaga
- ASB in cell types
- CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAT1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.66 | 1.84 | 3.00 | -0.59 | Weak Concordant | |||
| IKZF2_HUMAN | -0.55 | 1.83 | 1.00 | n/a | n/a |
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Motif analysis
