rs786772 chr10:47137789 C>T

Sequence
tgctgggagcttcattcgggctga[C/T]agcggcatttatgagagcaaatgt
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 2.72 -4.94 3.9·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  body mass index (bmi),  late onset alzheimers disease
GTEx eQTL Colon_Transverse,  Skin_Sun_Exposed_Lower_leg

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