rs787331 chr10:28811830 C>T
- Sequence
ttgtcagagatgcttgaactagag[C/T]gactccatcttgaatagaggctgg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NR4A1_HUMAN PTTG1_HUMAN NR2C1_HUMAN DDX20_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR4A1_HUMAN | n/a | 2.26 | 2.00 | n/a | No Hit | |||
| PTTG1_HUMAN | n/a | 2.65 | 2.00 | n/a | n/a | |||
| NR2C1_HUMAN | 0.31 | 1.63 | 2.00 | n/a | No Hit | |||
| DDX20_HUMAN | -0.53 | 3.46 | 2.00 | n/a | n/a | |||
| PBX2_HUMAN | -5.04 | 2.96 | 2.00 | 3.06 | Concordant |
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Motif analysis
