rs78875478 chr6:150270060 G>T
- Sequence
agcagggctggagcctgcaggggg[G/T]tggccagtgagggggaggggaagc
- ASB in cell types
- K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- NCOR1_HUMAN EGR1_HUMAN REQU_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | -1.95 | 2.78 | 1.00 | n/a | n/a | |||
| EGR1_HUMAN | -1.37 | 2.20 | 2.00 | -2.42 | Discordant | |||
| REQU_HUMAN | -1.68 | 1.86 | 1.00 | n/a | n/a | |||
| TAL1_HUMAN | -3.08 | 2.96 | 1.00 | n/a | No Hit | |||
| ZN316_HUMAN | -1.25 | 2.18 | 1.00 | -0.51 | Weak Discordant |
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Motif analysis
