rs78898241 chr8:103371307 C>T
- Sequence
tgcgggaatccccgacctgcggct[C/T]ctgaccacgggccaccccgcccag
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12892 (female B-cells lymphoblastoid cell line) | 2.67 | 0.31 | 1.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 0.70 | 1.03 | 1.12 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Whole_Blood