rs78907639 chr19:2051333 G>A
- Sequence
gctccgcccggcctcaccccctgc[G/A]cacgacgtgggcggagccagaaga
- ASB in cell types
- foreskin keratinocyte CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN BHE40_HUMAN STAT1_HUMAN TRI22_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.05 | 1.36 | 1.00 | n/a | No Hit | |||
| BHE40_HUMAN | n/a | 1.22 | 5.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.58 | 1.35 | 1.67 | n/a | No Hit | |||
| TRI22_HUMAN | 2.00 | n/a | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 0.81 | -0.81 | 1.00 | n/a | n/a |
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