rs78927294 chr1:59856836 G>A
- Sequence
ttgaaattctgcctttgccttcct[G/A]tttgctcagggcctcatgtttatc
- ASB in cell types
- breast tumor LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.71 | -0.19 | 1.46 | -1.13 | Weak Concordant | |||
| ESR1_HUMAN | 3.24 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
