rs78948271 chr2:120422464 C>T
- Sequence
aaaaatattgagatgtacacttgg[C/T]gtatgtactttaatgcatgtttgt
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.19 | -0.01 | 1.60 | 1.04 | Weak Discordant | |||
| ANDR_HUMAN | 1.41 | 0.45 | 1.98 | n/a | No Hit |
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Motif analysis
