rs78987468 chr6:134178426 G>A
- Sequence
gcggaggggtgcttgaggggaggg[G/A]gagacgggggagctgtgtgtgacg
- ASB in cell types
- tibial nerve HUVEC-C (HUVEC, umbilical vein endothelial cells) MS-1 (Small cell lung carcinoma) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- SUH_HUMAN CTCF_HUMAN EP300_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SUH_HUMAN | 3.02 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.95 | 0.88 | 1.09 | n/a | No Hit | |||
| EP300_HUMAN | -0.44 | 1.90 | 1.50 | n/a | n/a |
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