rs79040696 chr10:35547022 C>G
- Sequence
tctggaggtttacttaggcccagt[C/G]cctgttttctgctctcagcacagt
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -3.85 | 2.65 | 3.00 | n/a | No Hit | |||
| CTCF_HUMAN | -1.00 | 2.60 | 1.00 | n/a | No Hit |
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