ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs7908228
chr10:65501436
T
>
G
Sequence
agttcctatgctacttaagcatgg[T/G]ttttttccaggaacgcagagtaca
ASB in cell types
HepG2 (hepatoblastoma)
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXA2_HUMAN
ZN644_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN
0.98
-1.09
0.03
1.00
1.28
n/a
No Hit
ZN644_HUMAN
2.46
-2.49
0.03
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
birth weight
GTEx eQTL
Breast_Mammary_Tissue
,
Esophagus_Mucosa
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)