rs790840 chr5:127752845 T>C
- Sequence
cgttttttaagccggttggaaaag[T/C]gcggtattcgggtgggagtgaccc
- ASB in cell types
- K562 (myelogenous leukemia) breast tumor xenograft
- ASB for transcription factors
- ARI1B_HUMAN FOXA1_HUMAN TAF9B_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 3.29 | n/a | 2.00 | n/a | n/a | |||
| FOXA1_HUMAN | 2.33 | -4.79 | 2.00 | n/a | No Hit | |||
| TAF9B_HUMAN | 3.55 | n/a | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 3.34 | n/a | 2.00 | n/a | No Hit | |||
| EP400_HUMAN | 2.65 | n/a | 2.00 | n/a | n/a |
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