rs791223 chr12:92467044 T>C

Sequence
cgatgattcaaccccattggctgg[T/C]tcattccttttgtttcctctgcct
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.34 1.14 1.002.3·10-3 1.08 n/a n/a
CTCF_HUMAN 0.62 1.28 0.760.02 1.11 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Colon_Sigmoid Spleen Whole_Blood

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