rs79128000 chr2:54085327 G>A
- Sequence
gggtgtgagagtgcaccctgccac[G/A]ggactgcggactgtccggggctgg
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.36 | 0.31 | 1.00 | 1.06 | Weak Discordant |
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Motif analysis
