rs79130714 chr5:151758716 C>T
- Sequence
gccgcgagggaggctccgccccct[C/T]cagtcctgatccctgccggccgcg
- ASB in cell types
- GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.35 | -1.88 | 1.00 | 1.36 | Weak Discordant |
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Motif analysis
