rs791349 chr5:173766430 G>C
- Sequence
gtctatgtgggtgtgcctctgtgg[G/C]tgtgtggcatgacttgtctccttt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) A549 (lung carcinoma) 22RV1 (prostate carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- ESR1_HUMAN ANDR_HUMAN PRGR_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.30 | 1.59 | 2.89 | n/a | No Hit | |||
| ANDR_HUMAN | 2.65 | 0.21 | 2.00 | -1.13 | Weak Concordant | |||
| PRGR_HUMAN | -0.05 | 2.14 | 2.00 | n/a | No Hit | |||
| RAD21_HUMAN | 0.43 | 1.27 | 1.96 | n/a | n/a |
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Motif analysis
