rs79151625 chr5:1053325 C>T

Sequence
accagggggtgcccgcacgctcag[C/T]aggcacactgcaagaaaggataca
ASB in cell types
foreskin keratinocyte MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.95 -0.01 4.2·10-141.00 1.69 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Heart_Atrial_Appendage Whole_Blood

Download