rs79186925 chr1:169546698 T>C

Sequence
ctgcgcacctacaactatctgatc[T/C]gtgacaaaagcaagcaatagggaa
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) A549 (lung carcinoma) FT282 (normal human fallopian tube tissue)
ASB for transcription factors
SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC3_HUMAN 1.29 -0.23 0.051.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis

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