rs79203343 chr11:11622003 A>C
- Sequence
accggcccgcgctgctaggagaac[A/C]gcggcagcggcagcggcggcgggg
- ASB in cell types
- foreskin keratinocyte tibial nerve GM12878 (female B-cells lymphoblastoid cell line) SK-MEL-147 (melanoma)
- ASB for transcription factors
- CTCF_HUMAN ZN341_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.11 | 0.45 | 1.11 | n/a | No Hit | |||
| ZN341_HUMAN | 2.90 | n/a | 1.50 | -2.75 | Concordant |
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Motif analysis
