rs79209854 chr1:61742572 C>G
- Sequence
cgcaccaggtaaagcgtgaggtcc[C/G]ggctgtgcagtgcgcgctcgcccc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- ESR1_HUMAN ANDR_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.04 | 1.03 | 2.05 | n/a | No Hit | |||
| ANDR_HUMAN | 2.90 | n/a | 2.00 | 1.84 | Weak Discordant | |||
| ZFX_HUMAN | -0.87 | 1.53 | 2.00 | n/a | No Hit |
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Motif analysis
