rs79211467 chr1:225882492 C>G
- Sequence
ctgactgcgcctcccgcggtggcc[C/G]tcggcggtcctctgccccggcctg
- ASB in cell types
- MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- CTCF_HUMAN CDK8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.52 | 0.87 | 1.11 | -2.00 | Discordant | |||
| CDK8_HUMAN | -0.97 | 1.86 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Breast_Mammary_Tissue, Colon_Transverse, Pancreas, Skin_Sun_Exposed_Lower_leg, Whole_Blood