rs79211970 chr16:21102176 C>T
- Sequence
gccctgctgagcctcttctagagc[C/T]gccctctgctggcccctgctgtta
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM18526 (B – cells Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.98 | 1.54 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.19 | 1.20 | 1.40 | -1.47 | Weak Discordant |
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Motif analysis
