rs79215600 chr5:118531455 A>G
- Sequence
ttgaaaagggcagtacagtataca[A/G]ataaactgaagaagttatcattcc
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN BCOR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.55 | -0.11 | 2.00 | -3.84 | Concordant | |||
| ANDR_HUMAN | 2.73 | 0.31 | 2.00 | -1.43 | Weak Concordant | |||
| BCOR_HUMAN | 2.50 | -4.62 | 2.00 | n/a | n/a |
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Motif analysis
