rs79231807 chr17:78592619 G>A
- Sequence
ctccggaagccgcctcctgacccc[G/A]cgtcaagcaccgcggtggatggcg
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) monocytes from periferal blood CD14+ monocytes HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- TCF21_HUMAN STAT1_HUMAN SRBP2_HUMAN SP7_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.53 | n/a | 2.50 | n/a | No Hit | |||
| STAT1_HUMAN | 2.33 | n/a | 3.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 1.83 | n/a | 3.00 | 4.45 | Discordant | |||
| SP7_HUMAN | -2.13 | 2.48 | 1.50 | n/a | No Hit |
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Motif analysis
