rs79243554 chr6:156942483 A>C
- Sequence
accccatgggcctcaggccagcag[A/C]agggggagccagagtgggtctcag
- ASB in cell types
- WA01 (H1, human embryonic stem cells) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN FOXP1_HUMAN RAD21_HUMAN EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.41 | 1.57 | 1.60 | 1.60 | Weak Concordant | |||
| FOXP1_HUMAN | -2.67 | 2.91 | 1.00 | n/a | No Hit | |||
| RAD21_HUMAN | -2.08 | 2.45 | 1.00 | n/a | n/a | |||
| EGR1_HUMAN | -1.90 | 2.29 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
