rs7925747 chr11:74639738 C>T

Sequence
gctcataatgactgcttactgtta[C/T]agttcttttccaagtttcccttgg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN189_HUMAN SP7_HUMAN ZNF10_HUMAN OSR2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN189_HUMAN 4.12 -3.81 7.5·10-111.00 1.00 -0.45 Weak Concordant
SP7_HUMAN 3.31 -3.00 8.8·10-81.00 1.00 n/a No Hit
ZNF10_HUMAN 3.32 -3.46 2.5·10-41.00 1.00 n/a No Hit
OSR2_HUMAN 1.86 -3.13 0.021.00 1.50 n/a No Hit
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Motif analysis

ZN189_HUMAN Weak Concordant
ZN189_HUMAN pic

Genetic associations

GRASP colorectal cancer,  fasting insulin,  homa-b,  homa-ir,  microalbuminuria,  mitral annular calcium,  neuroblastoma (brain cancer),  total cholesterol
GTEx eQTL Brain_Putamen_basal_ganglia,  Testis,  Thyroid

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