rs79257575 chr17:3049015 A>T
- Sequence
ttggctgtcgcctccgggcctgcg[A/T]ctttgctcagcccctccggggagt
- ASB in cell types
- HepG2 (hepatoblastoma) CTV-1 (Adult T acute lymphoblastic leukemia) neural progenitors neural cell
- ASB for transcription factors
- FOXA1_HUMAN GATD1_HUMAN ETS1_HUMAN OLIG2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | n/a | 2.24 | 1.50 | n/a | No Hit | |||
| GATD1_HUMAN | 2.59 | -2.46 | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | 1.58 | -0.54 | 1.00 | n/a | No Hit | |||
| OLIG2_HUMAN | -0.75 | 1.16 | 1.00 | n/a | No Hit |
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