rs79279532 chr17:31012886 G>A

Sequence
acccagccaagaaattttttaaat[G/A]caaagttctctagccactttgtat
ASB in cell types
GM02255 (Lymphoblastoid Cell Lines) HMEC (human mammary epithelial cells) GM17942 (lymphoblastoid cell) glioblastoma cells
ASB for transcription factors
STAG1_HUMAN STAG2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.45 -0.16 1.6·10-51.00 1.07 n/a n/a
STAG2_HUMAN 2.17 n/a 0.051.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adrenal_Gland Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Spleen Thyroid

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