rs79282013 chr20:56451630 A>G
- Sequence
ctggacctgtaagcagatggtggc[A/G]gaccaggtggggtcagcgtggtgg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- FOXA1_HUMAN MAX_HUMAN ARI1A_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.78 | -0.41 | 3.28 | n/a | No Hit | |||
| MAX_HUMAN | 3.12 | -5.64 | 2.00 | 0.28 | Weak Discordant | |||
| ARI1A_HUMAN | 1.54 | 0.40 | 3.00 | n/a | No Hit |
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Motif analysis
