rs79291321 chr10:38527093 C>T
- Sequence
ggactctaatgtaacggaatgttg[C/T]gggctccaatggaataaaatggac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma)
- ASB for transcription factors
- EP300_HUMAN A0A126GW21_HUMAN ANDR_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -0.33 | 1.82 | 2.88 | n/a | n/a | |||
| A0A126GW21_HUMAN | n/a | 2.30 | 1.50 | n/a | n/a | |||
| ANDR_HUMAN | -4.40 | 1.77 | 3.33 | 0.29 | Weak Concordant | |||
| CREB1_HUMAN | -0.46 | 1.87 | 2.00 | n/a | No Hit |
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Motif analysis
