rs79297807 chr19:43464117 A>G
- Sequence
gagctctccccgtccgccccaccc[A/G]gttctcaactctctgctcctcgcg
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN CTBP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.79 | n/a | 2.00 | -0.59 | Weak Concordant | |||
| CTBP1_HUMAN | n/a | 2.94 | 2.00 | n/a | n/a |
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Motif analysis
