rs793017 chr5:172859505 G>A
- Sequence
aagggtgggaaaaaaaaatgtcct[G/A]aaggtcacagtgccgtcccaagcc
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) liver
- ASB for transcription factors
- TF65_HUMAN RXRA_HUMAN NOTC1_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | n/a | 2.51 | 2.50 | n/a | No Hit | |||
| RXRA_HUMAN | -1.26 | 2.32 | 1.50 | 1.81 | Weak Concordant | |||
| NOTC1_HUMAN | n/a | 1.62 | 2.50 | n/a | n/a | |||
| BRD4_HUMAN | 1.25 | -0.37 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
Genetic associations
GRASP longevity (exceptional longevity), longstanding arthritis, maternal transmission distortion, sporadic creutzfeldt-jakob disease, tetrology of fallot