ADASTRA v6.1.0
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rs7933
chr2:43225044
A
>
G
Sequence
ccgagaagctgaggctgtggtgca[A/G]cttgggccgcggctcccgcgggaa
ASB in cell types
SMMC-7721 (hepatocellular carcinoma)
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
SMMC-7721 (hepatocellular carcinoma)
1.60
n/a
4.2·10
-3
1.00
2.00
K562 (myelogenous leukemia)
0.72
0.26
0.02
1.00
1.99
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5
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Motif analysis
No data available
Genetic associations
GRASP
fasting blood glucose
,
hdl cholesterol change with statins
,
ldl cholesterol
,
serum creatinine
,
total cholesterol
,
waist hip ratio
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale