rs79346288 chr14:51652129 C>G
- Sequence
ggtttcgggagggtttctggaagt[C/G]gcgagtcccagcgaaggcagtgca
- ASB in cell types
- foreskin keratinocyte GM12890 (Lymphoblastoid Cell Lines) HepG2 (hepatoblastoma)
- ASB for transcription factors
- TYY1_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -1.47 | 2.92 | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | 1.72 | 0.47 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Hypothalamus, Cells_Cultured_fibroblasts, Nerve_Tibial, Pituitary, Testis