rs79349719 chr11:1559622 G>A

Sequence
cagggcttccgagaggccctcccc[G/A]tccccaggcatgacatcaccctgg
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells) 22RV1 (prostate carcinoma)
ASB for transcription factors
TCF21_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 2.20 n/a 2.7·10-31.00 2.50 n/a No Hit
ANDR_HUMAN 2.67 n/a 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Brain_Hypothalamus Colon_Sigmoid Esophagus_Mucosa Lung Whole_Blood

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