rs79355747 chr7:92633707 A>C

Sequence
tgtcaatgtggacaaactgttctg[A/C]agtatttatagcataatgtaatgt
ASB in cell types
MDA-MB-231 (breast adenocarcinoma) CD14+ monocytes MDM(monocyte derived macrophages)
ASB for transcription factors
GCR_HUMAN STAT1_HUMAN SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN n/a 3.02 1.001.1·10-6 2.00 n/a No Hit
STAT1_HUMAN 2.21 -1.46 2.2·10-31.00 2.00 n/a No Hit
SPI1_HUMAN 1.86 0.65 6.0·10-31.00 2.38 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis,  Thyroid

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