rs79362369 chr9:136118869 C>T
- Sequence
cccggactcgtcgcttcccgaggg[C/T]gtgcgtgcgtgcgtgcgtgcgcac
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma) CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ESR1_HUMAN ANDR_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.19 | 0.52 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.72 | -3.96 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.35 | -0.21 | 1.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen, Thyroid