rs79370759 chr18:77063319 G>A
- Sequence
tagcaaaagccccacagttcaaca[G/A]gcccttccaggtcggcatcacttg
- ASB in cell types
- CD14+ monocytes MDA-MB-231ERb(triple negative breast cancer)
- ASB for transcription factors
- STAT1_HUMAN ESR2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.66 | -0.68 | 2.00 | n/a | No Hit | |||
| ESR2_HUMAN | -1.43 | 0.88 | 1.50 | 0.81 | Weak Concordant |
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Motif analysis
