rs79400254 chr9:35489500 A>G
- Sequence
aggagtcacacacaggcatcttcc[A/G]tgtcccccacacatccggccctga
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) foreskin keratinocyte
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.47 | 1.48 | 1.17 | n/a | n/a | |||
| CTCF_HUMAN | 1.05 | 2.10 | 1.90 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Spinal_cord_cervical_c-1, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal