rs79435381 chr1:75842746 G>A
- Sequence
ctgggaggacgcccgttgccaggc[G/A]gaccttggtctagcggtagcataa
- ASB in cell types
- RWPE2 GM19193 (female B-cells Lymphoblastoid Cell Lines) RWPE1 (prostate epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.94 | 0.63 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Esophagus_Mucosa, Heart_Atrial_Appendage, Pancreas, Skin_Sun_Exposed_Lower_leg