rs79463340 chr20:56451572 T>C
- Sequence
aaatacactggcatgagtcagtgt[T/C]ctgagttcaggggaaagtaaacag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) MCF7 WS8 cells
- ASB for transcription factors
- FOXA1_HUMAN GRHL2_HUMAN MNT_HUMAN CLOCK_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.75 | -0.49 | 3.24 | n/a | No Hit | |||
| GRHL2_HUMAN | 1.91 | -3.98 | 2.83 | n/a | No Hit | |||
| MNT_HUMAN | 2.10 | n/a | 4.00 | n/a | No Hit | |||
| CLOCK_HUMAN | 2.12 | -0.69 | 3.00 | n/a | No Hit |
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